Introduction to ICELL8 technology

An open and flexible platform for developing your high-throughput single-cell assays


Imaging of a 5,184-nanowell chip on the ICELL8 cx platform

The ICELL8 cx Single-Cell System and the original ICELL8 Single-Cell System (modular) are open platforms that enable the processing of hundreds of single cells or nuclei, irrespective of size or shape, and can process up to eight samples in parallel. This makes them suitable for performing replicates and eliminating batch effects.

The system takes advantage of imaging to distinguish single-cell-containing wells from wells that are empty or contain multiple cells (thereby decreasing background) and provides a simple, automated workflow:

  • Cells are dispensed into a patented 5,184-nanowell SmartChip.
  • Images are created for every nanowell in the chip.
  • The acquired images are processed using the included CellSelect Software, with >85% accuracy identifying nanowells that contain only a single cell.
  • Library preparation reagents are selectively dispensed, dictated by the user, to the wells containing single cells, as identified by CellSelect Software or manually selected by the user.
  • The preinstalled CELLSTUDIO Software allows users to design custom, high-throughput NGS or single-cell applications on a nanoliter scale.

Explore the links below for an overview of ICELL8 technology, technical specifications for the ICELL8 cx system, application notes, webinars, and more.


Learn how ICELL8 technology allows flexibility, confidence, and control in your single-cell analysis.

Detailed technical specifications for the ICELL8 cx Single-Cell System.

Prevalidated NGS chemistries for the Shasta and ICELL8 cx single-cell systems.

Chips and accessories for use with the Shasta and ICELL8 cx single-cell systems.

View the growing list of cell types that have been isolated on the ICELL8 Single-Cell System.

Learn about the research areas being advanced with ICELL8 single-cell technology.

Find the right protocol to prepare your samples for use on the ICELL8 single-cell systems.

View our educational videos and webinars on a wide range of ICELL8 applications.

Posters highlighting ICELL8 applications and data.

Publications using the ICELL8 platform.

Takara Bio offers a variety of service options to help you get the best from your instrument.

Available service options for the original ICELL8 and ICELL8 cx systems.


ICELL8 Innovators Series

Discover how researchers developed the new CUT&Tag method for single-cell profiling of chromatin components with ICELL8 technology.

Learn more about how researchers used our ICELL8 Single-Cell System to develop a novel single-cell ATAC-seq workflow.

Discover how researchers used the ICELL8 Single-Cell System to perform scRNA-seq on fragile adult cardiomyocytes.