Applications for Single-Cell NGS automation

Single-cell automation application kits

Adaptations of our trusted chemistries for library preparation on the Shasta Single Cell System (Cat. # 640282) and  ICELL8 cx Single-Cell System (Cat. # 640188 or 640189) enable high-throughput NGS library prep with full gene-body coverage or whole-genome coverage. These applications allow you to identify novel biomarkers such as lncRNAs or tumor-driving mutation events like copy number variations (CNVs) or single nucleotide variations (SNVs) at single-cell resolution with fast and automated workflows.

Chips and accessories for use with the Shasta and ICELL8 cx single-cell systems.

View NGS automation system accessories


ICELL8 system

Improve detection of fusions, SNPs, and alternative splicing with the ICELL8 system

We adapted our trusted SMART-Seq chemistry on the ICELL8 system for improved full-length scRNA-seq, so you can:

  • Fully automate the processing of >1,000 individual cells into sequencing-ready libraries
  • Achieve uniform coverage from 5'→3'
  • Improve detection of gene fusions, SNPs, and splice variants

Read the technical note to see how our method compares to a 3'DE- and droplet-based method.

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