Discover the Shasta Single Cell System

 

Find MORE with our complete solutions for large-scale single-cell profiling. Reach your research goals with our single-cell NGS automation platform, new kits, and Cogent bioinformatics tools.

Our single-cell transcriptome and whole-genome profiling technologies will accelerate your research by:

  • Giving you high sample and cell throughput
  • Requiring less hands-on time with automated workflows
  • Capturing more information to uncover new biomarkers

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Shasta Total RNA-Seq Kit

  • Analyze full gene bodies of up to 100,000 single cells per run with outstanding sensitivity
  • Go beyond mRNA to uncover multiple RNA biotypes like nonpolyadenylated RNA
  • Detect splicing isoforms and gene fusions, enabling the discovery of novel biomarkers for tumor pathogenesis, prognosis, and treatment
  • Take advantage of easy-to-use bioinformatics tools to decode expression patterns of protein-coding and noncoding genes

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Shasta Whole-Genome Amplification Kit

  • Analyze up tp 1,500 single cells per run with whole genome coverage
  • Profile CNV data, including chromosomal aneuploidies, and SNV data to identify tumor-driving mutation events
  • Resolve tumor heterogeneity and track clonal evolution with user-friendly bioinformatics tools 

Literature

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Application note

Characterize chromosome arm-level CNV events, generate CNV profiles, and perform pseudobulk SNV analysis in tumor subclones with high-throughput single-cell whole-genome amplification.

Case study

Simultaneously detect splicing events and differential gene expression by combining high-throughput full-length single-cell RNA-seq and the MARVEL pipeline.

Technical notes


Tech note

Perform high-throughput single-cell transcriptome analysis and achieve full gene-body coverage with Shasta Total RNA-Seq

This technical note describes how researchers can obtain high throughput and sensitivity for full gene-body transcriptome analysis at the single-cell level with the Shasta Total RNA-Seq Kit.

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Tech note

High-throughput profiling of copy number variation at single-cell resolution

This technical note describes how researchers can perform single-cell DNA-seq with the Shasta Whole-Genome Amplification Kit.

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