COVID-19 publications - RNA-seq

SMARTer NGS

Next-generation sequencing has become the weapon of choice for many researchers in the fight against the coronavirus pandemic. RNA-sequencing (RNA-seq) in particular is crucial in serving to inform our understanding of viral pathogenesis and infection dynamics of SARS-CoV-2. Cited below are selected studies in which our RNA-seq technologies were utilized by our customers to advance this research.

Title Link Product
Single-cell RNA-seq
A method to identify respiratory virus infections in clinical samples using next-generation sequencing SMARTer Stranded RNA-Seq Kit
Defining the pandemic at the state level: Sequence-based epidemiology of the SARS-CoV-2 virus by the Arizona COVID-19 Genomics Union (ACGU) SMART-Seq Stranded Kit
Stranded RNA-seq
European context of the diversity and phylogenetic position of SARS-CoV-2 sequences from Polish COVID-19 patients SMART-Seq Stranded Kit
Complete Genome Sequence of a SARS-CoV-2 Strain Isolated in Northern Germany SMARTer Stranded Total RNA-Seq Kit v2 - Pico Input Mammalian
Genomic Epidemiology of SARS-CoV-2 in Guangdong Province, China SMARTer Stranded Total RNA-Seq Kit v2 - Pico Input Mammalian
Genomics functional analysis and drug screening of SARS-CoV-2 SMARTer Stranded Total RNA-Seq Kit v2 - Pico Input Mammalian
Transcriptomic similarities and differences in host response between SARS-CoV-2 and other viral infections SMARTer Stranded Total RNA-Seq Kit v2 - Pico Input Mammalian
Ultra-low input RNA-seq
Functional SARS-CoV-2-Specific Immune Memory Persists after Mild COVID‑19 SMART-Seq v4 Ultra Low Input RNA Kit
Baricitinib treatment resolves lower-airway macrophage inflammation and neutrophil recruitment in SARS-CoV-2-infected rhesus macaques SMART-Seq v4 Ultra Low Input RNA Kit
Association of respiratory allergy, asthma, and expression of the SARS-CoV-2 receptor ACE2 SMART-Seq v4 Ultra Low Input RNA Kit
Coronavirus disease (COVID-19) and fertility: viral host entry protein expression in male and female reproductive tissues SMART-Seq v4 Ultra Low Input RNA Kit
Expression of ACE2 and a viral virulence-regulating factor CCN family member 1 in human iPSC-derived neural cells: implications for COVID-19-related CNS disorders SMART-Seq v4 Ultra Low Input RNA Kit
Human iPSC-Derived Cardiomyocytes Are Susceptible to SARS-CoV-2 Infection SMART-Seq v4 Ultra Low Input RNA Kit
SARS-CoV-2 infection and replication in human fetal and pediatric gastric organoids SMART-Seq v4 Ultra Low Input RNA Kit