PrimeSTAR GXL DNA Polymerase

Cancer | Illumina sequencing

Sakaguchi, H., et al. Exome sequencing identifies secondary mutations of SETBP1 and JAK3 in juvenile myelomonocytic leukemia. Nature Genetics 45, 937–941 (2013).

Forensics | Environmental microbiology

Kakizaki, E., et al. Detection of diverse aquatic microbes in blood and organs of drowning victims: First metagenomic approach using high-throughput 454-pyrosequencing. Forensic Sci. 220, 135–146 (2012).

Immunology

Hosomichi, K., et al. Phase-defined complete sequencing of the HLA genes by Next-Generation Sequencing. BMC Genomics 14, 355 (2013).

Izawa, K., et al. Detection of base substitution-type somatic mosaicism of the NLRP3 gene with >99.9% statistical confidence by massively parallel sequencing. DNA Res. 19, 143–152 (2012).

Shiina, T., et al.Super high resolution for single molecule-sequence-based typing of classical HLA loci at the 8-digit level using next generation sequencers. Tissue Antigens 80, 305–316 (2012).

Pathogens

Al-Khedery, B., et al. Structure of the type IV secretion system in different strains of Anaplasma phagocytophilum. BMC Genomics 13, 678 (2012).

Novitsky, V. et al. Long-range HIV genotyping using viral RNA and proviral DNA for analysis of HIV drug resistance and HIV clustering. J. Clin. Microbiol. 53, 2581–2592 (2015).

Ode, H. et al. Quasispecies analyses of the HIV-1 Near-full-length genome with illumina MiSeq. Front. Microbiol. 6, 1258 (2015).

Takeda, T. S., Sugiyama, M. A. & Kanto, T. A. Establishment of a practical workflow using a next generation sequencer to search for novel SNPs associated with the anti - HCV treatment response. Juntendo Med. J. 60, 568–575 (2014).

Stem cells | Illumina sequencing

Sugiura, M., et al. Induced pluripotent stem cell generation-associated point mutations arise during the initial stages of the conversion of these cells. Stem Cell Reports 2, 52–63 (2013).
*also used Titanium Taq

General

Hosomichi K. et.al. Phase-defined complete sequencing of the HLA genes by next-generation sequencing. BMC Genomics 28,355 (2013).

Hosomichi, K., Shiina, T., Tajima, A. & Inoue, I. The impact of next-generation sequencing technologies on HLA research. J. Hum. Genet. 60, 665–73 (2015).

Mayor, N. P. et al. HLA typing for the next generation. PLoS One 10, (2015).

Shiina, T. et al. Rapid evolution of major histocompatibility complex class I genes in primates generates new disease alleles in humans via hitchhiking diversity. Genetics 173, 1555–1570 (2006).

High-throughput applications

Ehrenberg, P. K. et al. High-throughput multiplex HLA genotyping by next-generation sequencing using multi-locus individual tagging. BMC Genomics 15, 864 (2014).

Ozaki, Y., et al. HLA-DRB1, -DRB3, -DRB4 and -DRB5 genotyping at a super-high resolution level by long range PCR and high-throughput sequencing. Tissue Antigens 83, 10–16 (2014).