Cogent NGS Analysis Pipeline download
Thank you for your interest in the Cogent™ NGS Analysis Pipeline!
Download the software
Click on the icon to download the CogentAP install package.
NOTE: A persistent internet connection is required during installation.
Supported operating systems
CogentAP can be installed on the following versions of Linux:
- CentOS 6.9 & 6.10
- RedHat 7.5
- Ubuntu 17
For analyzing Illumina NextSeq® High Output data:
- 24-core CPU
- 64 GB+ RAM
- 500 GB+ available hard drive space
Analyzing MiniSeq™ or MiSeq® outputs may be possible on servers with less computational power than the specifications above. Analysis of HiSeq® or NovaSeq™ outputs would require better hardware than is listed.
Additional third-party software dependencies*
- Conda (or Miniconda3)
- bcl2fastq conversion software
*Not included with the software; must be downloaded and installed separately.
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