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  • ‹ Back to RNA-seq
  • mRNA-seq
    • Long-read mRNA-seq
    • Full-length mRNA-seq
    • Full-length mRNA-seq and RNA counting with UMIs
    • 3’ Differential Expression
    • Target capture
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RNA-seq selection guide
Technical notes Stranded libraries from single cells
Technical notes
Data on streamlined single-cell mRNA-seq
Guest webinar: automating the SMART-seq HT kit Guest webinar: automating the SMART-Seq HT Kit
Home › Products › Next-generation sequencing › RNA-seq › mRNA-seq

RNA-seq

  • mRNA-seq
    • Long-read mRNA-seq
    • Full-length mRNA-seq
      • SMART-Seq mRNA Single Cell LP and SMART-Seq mRNA Single Cell
      • SMART-Seq mRNA LP and SMART-Seq mRNA
      • SMART-Seq mRNA HT and SMART-Seq mRNA HT LP
    • Full-length mRNA-seq and RNA counting with UMIs
    • 3’ Differential Expression
    • Target capture
  • Total RNA-seq
    • SMART-Seq Total RNA-Seq Single Cell (ZapR Mammalian)
    • SMART-Seq Total RNA Pico Input with UMIs (ZapR Mammalian)
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    • Ribosomal RNA removal
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    • SMART-Seq Stranded for total RNA-seq
    • Pico-input strand-specific total RNA-seq for mammalian samples v2
    • Pico-input strand-specific total RNA-seq for mammalian samples v3
    • SMART-Seq Single Cell for scRNA-seq
    • SMART-Seq HT for streamlined mRNA-seq
    • SMARTer RNA Unique Dual Index Kits
Contact Sales
RNA-seq selection guide
Technical notes Stranded libraries from single cells
Technical notes
Data on streamlined single-cell mRNA-seq
Guest webinar: automating the SMART-seq HT kit Guest webinar: automating the SMART-Seq HT Kit

mRNA-seq—for single-cell and ultra-low input RNA samples

NOTE: We are updating the names and formats of several of our NGS RNA-seq kits. Details of the changes are provided on the relevant product pages for these kits. See a complete list of kits with new names and the existing kits they will replace here.

Takara Bio’s SMART-Seq mRNA kits are ideally suited for library preparation from single cell and bulk ultra-low input samples. Check out the following pages to learn more about the types of mRNA sequencing and the kits available to help you implement it.

NOTE: We are updating the names and formats of several of our NGS RNA-seq kits. Details of the changes are provided on the relevant product pages for these kits. See a complete list of kits with new names and the existing kits they will replace here.

Messenger RNA sequencing (mRNA-seq) is used for selectively profiling the protein coding transcripts in a sample. The method enriches or captures poly-adenylated or poly(A) RNAs which represent only a small fraction of the total transcriptome, providing a cost-effective approach for sequencing only the mRNA species. It is a powerful technique for measuring gene expression, studying differential gene expression changes across different experimental or disease conditions, identifying novel transcripts, etc.

Takara Bio’s SMART-Seq mRNA kits are ideally suited for library preparation from single cell and bulk ultra-low input samples. Check out the following pages to learn more about the types of mRNA sequencing and kits available to help you implement it.

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Long-read mRNA-seq

Full-length mRNA-seq

  • SMART-Seq mRNA Single Cell LP and SMART-Seq mRNA Single Cell
  • SMART-Seq mRNA LP and SMART-Seq mRNA
  • SMART-Seq mRNA HT and SMART-Seq mRNA HT LP

Full-length mRNA-seq and RNA counting with UMIs

3’ Differential Expression

Target capture


High-throughput solutions

Shasta Single Cell System

Shasta technologies enable the detection of splicing isoforms, gene fusions, and segmental CNVs in more cells than ever before.

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Takara Bio USA, Inc. provides kits, reagents, instruments, and services that help researchers explore questions about gene discovery, regulation, and function. As a member of the Takara Bio Group, Takara Bio USA is part of a company that holds a leadership position in the global market and is committed to improving the human condition through biotechnology. Our mission is to develop high-quality innovative tools and services to accelerate discovery.

FOR RESEARCH USE ONLY. NOT FOR USE IN DIAGNOSTIC PROCEDURES (EXCEPT AS SPECIFICALLY NOTED).

Clontech, TaKaRa, cellartis

  • Products
  • COVID-19 research
  • Next-generation sequencing
  • Real-time PCR
  • Stem cell research
  • mRNA and cDNA synthesis
  • PCR
  • Cloning
  • Gene function
  • Protein research
  • Antibodies and ELISA
  • New products
  • Special offers
  • COVID-19 research
  • Viral detection with qPCR
  • SARS-CoV-2 pseudovirus
  • Human ACE2 stable cell line
  • Viral and host sequencing
  • Vaccine development
  • CRISPR screening
  • Drug discovery
  • Immune profiling
  • Publications
  • Next-generation sequencing
  • Spatial omics
  • RNA-seq
  • DNA-seq
  • Single-cell NGS automation
  • Reproductive health
  • Bioinformatics tools
  • Immune profiling
  • Real-time PCR
  • Great value master mixes
  • Signature enzymes
  • High-throughput real-time PCR solutions
  • Detection assays
  • References, standards, and buffers
  • Stem cell research
  • Media, differentiation kits, and matrices
  • Stem cells and stem cell-derived cells
  • mRNA and cDNA synthesis
  • In vitro transcription
  • cDNA synthesis kits
  • Reverse transcriptases
  • RACE kits
  • Purified cDNA & genomic DNA
  • Purified total RNA and mRNA
  • PCR
  • Most popular polymerases
  • High-yield PCR
  • High-fidelity PCR
  • GC rich PCR
  • PCR master mixes
  • Cloning
  • In-Fusion seamless cloning
  • Competent cells
  • Ligation kits
  • Restriction enzymes
  • Gene function
  • Gene editing
  • Viral transduction
  • Fluorescent proteins
  • T-cell transduction and culture
  • Tet-inducible expression systems
  • Transfection reagents
  • Cell biology assays
  • Protein research
  • Purification products
  • Two-hybrid and one-hybrid systems
  • Mass spectrometry reagents
  • Antibodies and ELISA
  • Primary antibodies and ELISAs by research area
  • Fluorescent protein antibodies
  • Special offers
  • Lab Essentials
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  • OEM
  • Instrument services
  • Gene and cell therapy manufacturing
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  • mRNA and cDNA synthesis
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  • Protein research
  • Antibodies and ELISA
  • Automation systems
  • Shasta Single Cell System introduction
  • SmartChip Real-Time PCR System introduction
  • ICELL8 introduction
  • Next-generation sequencing
  • RNA-seq
  • Technical notes
  • Technology and application overviews
  • FAQs and tips
  • DNA-seq protocols
  • Bioinformatics resources
  • Webinars
  • Real-time PCR
  • Download qPCR resources
  • Overview
  • Reaction size guidelines
  • Guest webinar: extraction-free SARS-CoV-2 detection
  • Technical notes
  • mRNA and cDNA synthesis
  • mRNA synthesis
  • cDNA synthesis
  • PCR
  • Citations
  • PCR selection guide
  • Technical notes
  • FAQ
  • Cloning
  • Automated In-Fusion Cloning
  • In-Fusion Cloning general information
  • Primer design and other tools
  • In‑Fusion Cloning tips and FAQs
  • Applications and technical notes
  • Stem cell research
  • Overview
  • Protocols
  • Technical notes
  • Gene function
  • Gene editing
  • Viral transduction
  • T-cell transduction and culture
  • Inducible systems
  • Cell biology assays
  • Protein research
  • Capturem technology
  • Antibody immunoprecipitation
  • His-tag purification
  • Other tag purification
  • Expression systems
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  • Interview: adapting to change with Takara Bio
  • Applications
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  • mRNA and protein therapeutics
  • Characterizing the viral genome and host response
  • Identifying and cloning protein targets
  • Expressing and purifying protein targets
  • Immunizing mice and optimizing vaccines
  • Pathogen detection
  • Sample prep
  • Detection methods
  • Identification and characterization
  • SARS-CoV-2
  • Antibiotic-resistant bacteria
  • Food crop pathogens
  • Waterborne disease outbreaks
  • Viral-induced cancer
  • Immunotherapy research
  • T-cell therapy
  • Antibody therapeutics
  • T-cell receptor profiling
  • TBI initiatives in cancer therapy
  • Cancer research
  • Kickstart your cancer research with long-read sequencing
  • Sample prep from FFPE tissue
  • Sample prep from plasma
  • Cancer biomarker quantification
  • Single cancer cell analysis
  • Cancer transcriptome analysis
  • Cancer genomics and epigenomics
  • HLA typing in cancer
  • Gene editing for cancer therapy/drug discovery
  • Alzheimer's disease research
  • Antibody engineering
  • Sample prep from FFPE tissue
  • Single-cell sequencing
  • Reproductive health technologies
  • Embgenix FAQs
  • Preimplantation genetic testing
  • ESM partnership program
  • ESM Collection Kit forms
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  • Develop vaccines for HIV
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